All functions
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analyze_bg()
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Analyze Blood Gases |
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autoplot(<date_1d>)
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Plot Datetime |
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autoplot(<datetime_1d>)
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Plot Datetime |
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autoplot(<heat_cal>)
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Plot Calendar Heatmap |
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autoplot(<integer_1d>)
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Plot Integer |
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autoplot(<integer_2d>)
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Plot Integer |
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autoplot(<real_1d>)
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Plot Real Valued Dataitem |
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autoplot(<real_2d>)
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Plot Real |
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autoplot(<string_1d>)
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Plot String |
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autoplot(<string_2d>)
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Plot String |
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autoplot(<time_1d>)
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Plot Time |
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characterise_episodes()
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Characterise Episodes |
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characterise_spells()
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Characterise Spells |
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clean()
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Clean Table |
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clean_column()
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Clean Column |
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connect()
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Establishes a connection to the database |
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coverage()
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verify Event Plausibility - Coverage Checks (S3 Generic) |
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create_calendar_template()
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Calendar Template for Count Data |
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create_grid()
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Calendar Gridlines |
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cross_entropy()
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Calculate Cross Entropy |
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daily_admissions()
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Daily Admissions for each Site |
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daily_events()
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Daily Events for HIC Data item by Site |
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episode_varacity()
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Summarise Non-Verifiable Episodes |
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event_occurrances()
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Event Occurrances for each Site |
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expand_missing()
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Fill in 2d Table to make a Sparse Table |
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extract()
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Extract NHIC Events |
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extract_1d()
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Extract 1d Values |
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extract_2d()
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Extract 2d Values |
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extract_demographics()
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Extract 1d data from CC-HIC |
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extract_timevarying()
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Extract & Reshape Timevarying Dateitems |
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find_first_sunday()
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Find First Sunday |
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generate_icnarc()
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Generate ICNARC Diagnostic Codes |
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generate_nhs()
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Generate NHS Numbers |
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generate_post_code()
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Generate Post Code |
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inspectEHR
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inspectEHR |
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inv_logit()
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Inverse Logistic Function |
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ks_test()
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Pairwise Kolmogorov-Smirnov Distance |
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make_core()
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Core table |
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make_dict()
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Determine dimentionality of Events |
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make_heatcal()
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Make a heat_cal object |
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make_reference()
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Make reference Table |
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plot_ecdf()
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Plot CC-HIC Data item eCDF |
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plot_hist()
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Plot Histogram |
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plot_ks()
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Plot Kolmogorov-Smirnov Test |
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plot_patient()
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Plot Patient |
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plot_periodicity()
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Plot periodicity |
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process_item_timestamp()
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Process episode with a timestamp |
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qref
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Data quality reference table for CC-HIC. Version 1.1 |
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report()
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CC-HIC Data Quality Report |
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report_cases_daily()
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Reports Case Numbers according to day |
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resolve_date_time()
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Resolve DateTime |
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retrieve_tables()
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Retrieve Database Tables |
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round_any()
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Round any |
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summarise_verification()
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Collate and Summarise Verification Information |
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sync()
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Synchronise Project with IDHS |
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theme_cchic()
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CC-HIC ggplot2 Theme |
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unit_admissions()
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Report Admission Numbers for each Unit |
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verify_bounds()
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verify Event Plausibility - Boundary Checks (S3 Generic) |
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verify_bounds_2d()
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verify boundaries of 2d data items |
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verify_chronology()
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Verify Chronology |
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verify_complete()
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verify Completeness |
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verify_duplicate()
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verify Event Plausibility - Duplication Checks (S3 Generic) |
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verify_episodes()
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Verify Episodes |
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verify_event()
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Verify CC-HIC Events |
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verify_events()
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Verify CC-HIC Data |
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verify_icnarc()
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Varify ICNARC Diagnostic Code |
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verify_nhs()
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Verify NHS Numbers |
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verify_periodicity()
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verify Event Plausibility - Periodicity Checks (S3 Generic) |
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verify_periodicity_generic()
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verify periodicity of 2d class |
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verify_post_code()
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Verify Post Code |
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verify_range()
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verify Event Plausibility - Range Checks (S3 Generic) |
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verify_range(<date_1d>)
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Range Checks - Dates |
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verify_range(<datetime_1d>)
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Range Checks - Datetimes |
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verify_range(<time_1d>)
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Range Checks - Times |
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verify_range_numeric()
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Range Checks - Numeric |
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verify_range_string()
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Range Checks - String |
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weekly_admissions()
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Report Weekly Admissions |